General Chemistry
Integrated Core: General Chemistry with Lab
Chemistry and the Policy of Sustainable Energy Technologies
Fundamental Techniques of Experimental Chemistry
Experimental Methods in Solar Energy Conversion
Synthesis and Analysis of Organic and Inorganic Compounds
Advanced Techniques of Synthesis and Analysis
Physical and Biophysical Chemistry Laboratory
Advanced Experimental Methods in Bioorganic Chemistry
Procedures of Synthetic Chemistry for Premedical Students
Chemical Synthesis and Characterization for Chemical Engineering
Frontiers in Chemistry
Ch 10 ab is a weekly seminar by a member of the chemistry department on a topic of current research; the topic will be presented at an informal, introductory level. Ch 10 c is a research-oriented laboratory course, which will be supervised by a chemistry faculty member. Weekly class meetings will provide a forum for participants to discuss their research projects. Graded pass/fail.
Biochemistry Laboratory
Chemical Equilibrium and Analysis
Chemical Equilibrium and Analysis Laboratory
Principles of Chemical Measurements
Physical Chemistry
Organic Chemistry
Chemical Research
Offered to B.S. candidates in chemistry. Units in accordance with work accomplished. Prerequisite: consent of research supervisor. Experimental and theoretical research requiring a report containing an appropriate description of the research work.
Independent Reading in Chemistry
Occasional advanced work involving reading assignments and a report on special topics. No more than 12 units in Ch 81 may be used as electives in the chemistry option.
Senior Thesis Research
Three terms of Ch 82 are to be completed during the junior and/or senior year of study. At the end of the third term, students enrolled in Ch 82 will present a thesis of approximately 20 pages (excluding figures and references) to the mentor and the Chemistry Curriculum and Undergraduate Studies Committee. The thesis must be approved by both the research mentor and the CUSC. An oral thesis defense will be arranged by the CUSC in the third term for all enrollees. The first two terms of Ch 82 will be taken on a pass/fail basis, and the third term will carry a letter grade.
Oral Presentation
Training in the techniques of oral presentation of chemical and biochemical topics. Practice in the effective organization and delivery of technical reports before groups. Strong oral presentation is an essential skill for successful job interviews and career advancement. Graded pass/fail. Class size limited to 12 students.
Scientific Writing
Training in the writing of scientific research papers for chemists and chemical engineers. Fulfills the Institute scientific writing requirement.
Chemistry Tutorials
Introduction to Inorganic Chemistry
Intermediate Organic Chemistry
A survey of selected topics beyond introductory organic chemistry, including reaction mechanisms and catalysis.
Social Media for Scientists
An introduction to the use of social media for scientific communication. Social media platforms are discussed in the context of their use to professionally engage scientific communities and general audiences. Topics will include ethics, privacy, reputation management, ownership and the law, and will focus on the use and impact of social media for personal and professional career development. Lectures will include presentations by invited experts in various specialties, a number of whom will have worldwide recognition. Not offered 2026-27.
Introduction to Biochemistry
Biochemistry of Gene Expression
Intermediate Inorganic Chemistry
Introduction to group theory, ligand field theory, and bonding in coordination complexes and organotransition metal compounds. Systematics of bonding, reactivity, and spectroscopy of commonly encountered classes of transition metal compounds.
Squishy Engineering: Using Soft Materials to Solve Hard Problems
Introduction to Electrochemistry
Discussion of the fundamentals and applications of electrochemistry with an emphasis on the structure of electrode-electrolyte interfaces, mechanisms by which charge is transferred across it, kinetics of mass transfer to the interface, experimental techniques used to study electrode reactions, and application of electrochemical techniques to study materials chemistry. Topics may vary but usually include electrochemical thermodynamics, potential step waveforms, the electrical double layer, charge transfer kinetics, mass transfer kinetics, voltammetry, chronocoulometry, EIS, and RDE. Not offered 2026-27.
Nature of the Chemical Bond
Atomic-Level Simulations of Materials and Molecules
Structure Determination by X-ray Crystallography
This course provides an introduction to small molecule X-ray crystallography. Topics include symmetry, space groups, diffraction by crystals, the direct and reciprocal lattice, Patterson and direct methods for phase determination, and structure refinement. It will cover both theoretical and applied concepts and include hands-on experience in data collection, structure solution and structure refinement.
The Elements of Quantum Chemistry
Molecular Spectroscopy
Quantum mechanical foundations of the spectroscopy of molecules. Topics include the theory of radiation-matter interactions, applications of group theory to spectroscopy, angular momentum, magnetic resonance spectroscopy, rotational spectroscopy, vibrational spectroscopy, electronic spectroscopy, and photoelectron spectroscopy.
Nuclear Chemistry
A survey course in the properties of nuclei, and in atomic phenomena associated with nuclear-particle detection. Topics include rates of production and decay of radioactive nuclei; interaction of radiation with matter; nuclear masses, shapes, spins, and moments; modes of radioactive decay; nuclear fission and energy generation. Not offered 2026-27.
Cosmochemistry
Introduction to Biophotonics
This course will cover basic optics and introduce modern optical spectroscopy principles and microscopy techniques. Topics include molecular spectroscopy, linear and nonlinear florescence microscopy, Raman spectroscopy, coherent microscopy, single-molecule spectroscopy, and super-resolution imaging.
Biomolecular Engineering Laboratory
Chemical Kinetics and Reaction Dynamics
Physical description and computations of chemical reactions and photochemistry with applications in air pollution, planetary atmospheres and condensed phases. Topics include: kinetic modeling, time-dependent quantum mechanics, rate constants, transition state theory intermolecular potentials, classical two-body elastic scattering, reactive scattering, nonadiabatic processes, statistical theories of unimolecular reactions, photochemistry, laser and molecular beam methods, theory of electron transfer, solvent effects, condensed phase dynamics, surface reactions, isotope effects. Not offered 2026-27.
Data Science for Chemical Systems
Challenges in Data Science for Chemical Systems
Student groups complete a one-term, data-science project that addresses an instructor-approved chemical engineering challenge. The project may be an original research idea; related to work by a research group at the Institute; an entry in a relevant national/regional contest; a response to an industry relationship; or other meaningful opportunity. There is no lecture, but students participate in weekly progress updates. A student may not select a project too similar to research completed to fulfill requirements for ChE 80 or ChE 90 abc.
Principles and Applications of Semiconductor Photoelectrochemistry
The properties and photoelectrochemistry of semiconductors and semiconductor/liquid junction solar cells will be discussed. Topics include optical and electronic properties of semiconductors; electronic properties of semiconductor junctions with metals, liquids, and other semiconductors, in the dark and under illumination, with emphasis on semiconductor/liquid junctions in aqueous and nonaqueous media. Problems currently facing semiconductor/liquid junctions and practical applications of these systems will be highlighted. Part b not offered 2026-27.
Aquatic Chemistry of Natural Waters
NMR Spectroscopy for Structural Identification
This course will address both one-dimensional and two-dimensional techniques in NMR spectroscopy which are essential to elucidating structures of organic and organometallic samples. Dynamic NMR phenomena, multinuclear, paramagnetic and NOE effects will also be covered. An extensive survey of multipulse NMR methods will also contribute to a clear understanding of two-dimensional experiments. (Examples for Varian NMR instrumentation will be included.) Not offered 2026-27.
Advanced Organic Chemistry
An advanced survey of selected topics in modern organic chemistry. Topics vary from year to year and may include structural and theoretical organic chemistry; materials chemistry; macromolecular chemistry; mechanochemistry; molecular recognition/supramolecular chemistry; reaction mechanisms; reactive intermediates; pericyclic reactions; and photochemistry. Not offered 2026-27.
Advanced Chemical Biology
Bioorganic Chemistry of Nucleic Acids
The course will examine the bioorganic chemistry of nucleic acids, including DNA and RNA structures, molecular recognition, and mechanistic analyses of covalent modification of nucleic acids. Topics include synthetic methods for the construction of DNA and RNA; separation techniques; recognition of duplex DNA by peptide analogs, proteins, and oligonucleotide-directed triple helical formation; RNA structure and RNA as catalysts (ribozymes). Not offered 2026-27.
Polymer Chemistry
An introduction to the chemistry of polymers, including synthetic methods and mechanisms of macromolecule formation, characterization techniques, reactivity, and applications. Not offered 2026-27.
Polymer Physics
Tutorial in Organic Chemistry
Electrocatalytic Reaction Engineering
Advanced Inorganic Chemistry
Organometallic Chemistry
A general discussion of the reaction mechanisms and the synthetic and catalytic uses of transition metal organometallic compounds. Not offered 2026-27.
Electrified catalytic synthesis
Discussion of fundamental and applied aspects of electron transfer steps involved in making and breaking chemical bonds at catalytic sites, with examples ranging from abiotic to biotic systems. Foundational principles are rooted in thermodynamics, kinetics, and transport. The course alternates between lecture and semi-structured student-driven projects. Not offered 2026-27.
Introduction to Statistical Thermodynamics
Chemical Thermodynamics
An advanced course emphasizing the conceptual structure of modern thermodynamics and its applications. Review of the laws of thermodynamics; thermodynamic potentials and Legendre transform; equilibrium and stability conditions; metastability and phase separation kinetics; thermodynamics of single-component fluid and binary mixtures; models for solutions; phase and chemical equilibria; surface and interface thermodynamics; electrolytes and polymeric liquids.
Biochemistry and Biophysics of Macromolecules and Molecular Assemblies
Detailed analysis of the structures of the four classes of biological molecules and the forces that shape them. Introduction to molecular biological and visualization techniques. Not offered 2026-27.
Atmospheric Chemistry I
Biophysical/Structural Methods
Macromolecular Machines of the Central Dogma
Macromolecular Function: kinetics, energetics, and mechanisms
Chemical Research
Offered to M.S. candidates in chemistry. Graded pass/fail.
Biochemistry Seminar Course
Chemical Physics Seminar
Bioinorganic Chemistry
Current topics in bioinorganic chemistry will be discussed, including metal storage and regulation, metalloenzyme structure and reactions, biological electron transfer, metalloprotein design, and metal-nucleic acid interactions and reactions. Not offered 2026-27.
Advanced Ligand Field Theory
A tutorial course of problem solving in the more advanced aspects of ligand field theory. Recommended only for students interested in detailed theoretical work in the inorganic field.
Advanced Quantum Chemistry
The electronic structure of atoms and molecules, the interactions of radiation fields and matter, scattering theory, and reaction rate theory. Not offered 2026-27.
Optical and Nonlinear Spectroscopy
Quantum mechanical foundations of optical spectroscopy as applied to chemical and material systems. Topics include optical properties of materials, nonlinear and quantum optics, and multidimensional spectroscopy.
Macromolecular Structure Determination with Modern X-ray Crystallography Methods
Chemical Synthesis
Organic Reaction Mechanisms
This course will discuss and uncover useful strategies and tactics for approaching complex reaction mechanisms prevalent in organic reactions. Topics include: cycloaddition chemistry, rearrangements, radical reactions, metal-catalyzed processes, photochemical reactions among others. Recommended only for students interested in advanced study in organic chemistry or related fields. Not offered 2026-27.
Advanced Topics in Chemistry
Content will vary from year to year; topics are chosen according to the interests of students and staff. Visiting faculty may present portions of this course. In Spring 2020 the class will be a seminar course in pharmaceutical chemistry with lectures by industrial researchers from both discovery (medicinal chemistry) and development (process chemistry) departments. Not offered 2026-27.
Advanced Topics in Chemical Biology
Advanced Topics in Chemical Biology. Hours and units to be arranged. Content will vary from year to year; topics are chosen according to the interests of students and staff. Not offered 2026-27.
Advanced Topics in Chemical Physics
Content will vary from year to year; topics are chosen according to the interests of students and staff. Not offered 2026-27.
Advanced Topics in Biochemistry
Hours and units to be arranged. Content will vary from year to year; topics are chosen according to the interests of students and staff. Not offered 2026-27.
Rotations in Chemistry
By arrangement with members of the faculty, properly qualified graduate students will have the opportunity to engage in a short-term research project culminating in a presentation to their peers enrolled in the course and participating laboratories. (Pass-Fail only).
Chemical Research
By arrangement with members of the faculty, properly qualified graduate students are directed in research in chemistry.